Subset the BarcodeQcSet

Subset the BarcodeQcSet

# S4 method for BarcodeQcSet
subset(x, i, drop = TRUE)

# S4 method for BarcodeQcSet,ANY,ANY,ANY
[(x, i, drop = TRUE)

Arguments

x

A BarcodeQcSet object

i

A integer vector or a character vector, specifying the selected samples.

drop

a logical value, if TRUE, when only one sample is selected, the output will be a BarcodeQc object.

Value

A BarcodeQcSet or BarcodeQc

Examples

example_data <- system.file("extdata", "mef_test_data", package = "CellBarcode")
fq_files <- dir(example_data, "fastq.gz", full=TRUE)
qc_noFilter <- bc_seq_qc(fq_files) 
qc_noFilter[1:3]
#> The sequence QC set, use `[]` to select sample:
#>      5290_10_BCM_195_mef_mixb_GTCATTG_S11_R1_001.fastq.gz
#>      5290_1_BCM_50000_mef_mixa_GTTCTCC_S2_R1_001.fastq.gz
#>      5290_2_BCM_50000_mef_mixb_GATGTGT_S5_R1_001.fastq.gz