Gets barcode sequences

bc_barcodes used to get the barcode sequences in BarcodeObj object. The input BarcodesObj object should be pre-processed by bc_cure_* functions, such as bc_cure_depth, bc_cure_umi.

bc_barcodes(barcodeObj, unlist = TRUE)

# S4 method for class 'BarcodeObj'
bc_barcodes(barcodeObj, unlist = TRUE)

Arguments

barcodeObj

A BarcodeObj object.

unlist

A logical value. If TRUE, the function returns a vector of unique barcode list from all samples; otherwise a list will be returned. In the latter case, each element of the list contains the barcodes of a sample.

Value

A character vector or a list.

Examples

data(bc_obj)

# Get unique barcodes vector of all samples
bc_barcodes(bc_obj)
#> [1] "AGAG"  "AAAG"  "AGAAG" "ACAAG" "AACG" 

# Get a list with each element containing barcodes from one sample
bc_barcodes(bc_obj, unlist = FALSE)
#> $test1
#> [1] "AGAG"  "AAAG"  "AGAAG" "ACAAG"
#> 
#> $test2
#> [1] "AACG"  "AGAG"  "AAAG"  "ACAAG" "AGAAG"
#> 

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