bc_barcodes.Rd
bc_barcodes
used to get the barcode sequences in BarcodeObj
object. The input
BarcodesObj
object should be pre-processed by bc_cure_*
functions, such as bc_cure_depth
, bc_cure_umi
.
bc_barcodes(barcodeObj, unlist = TRUE)
# S4 method for BarcodeObj
bc_barcodes(barcodeObj, unlist = TRUE)
A BarcodeObj
object.
A logical value. If TRUE, the function returns a vector of unique barcode list from all samples; otherwise a list will be returned. In the latter case, each element of the list contains the barcodes of a sample.
A character vector or a list.
data(bc_obj)
# Get unique barcodes vector of all samples
bc_barcodes(bc_obj)
#> [1] "AGAG" "AAAG" "AGAAG" "ACAAG" "AACG"
# Get a list with each element containing barcodes from one sample
bc_barcodes(bc_obj, unlist = FALSE)
#> $test1
#> [1] "AGAG" "AAAG" "AGAAG" "ACAAG"
#>
#> $test2
#> [1] "AACG" "AGAG" "AAAG" "ACAAG" "AGAAG"
#>
###