Package index • scMitoMut

All functions
`export_dt()` `export_df()` `export_pval()` `export_binary()` `export_af()`	Export the mutation matrix
`filter_loc()`	Filter mutations
`get_pval()`	Get p-value list for single locus
`open_h5_file()`	Open H5 file
`parse_mgatk()`	Load mtGATK output
`parse_table()`	Load allele count table
`plot_af_coverage()`	QC plot: 2D scatter plot for coverage ~ AF
`plot_heatmap()`	Heatmap plot
`format(<mtmutObj>)` `print(<mtmutObj>)` `is.mtmutObj()`	Print mtmutObj object
`process_locus_bmbb()`	Fit tree models for one locus
`rm_mtmutObj()`	Remove mtmutObj object
`run_model_fit()`	Fit binomial mixture model for every candidate locus
`scMitoMut-package` `scMitoMut`	scMitoMut
`subset_cell()` `subset_loc()`	Subset cell and loci

Reference